Gregor Rot


Whats up?
#computers #bioinformatics #books #couchsurfing

Bioinformatics Research
  alternative polyadenylation
  alternative splicing
  RNA-protein binding
  metagenomics
  genome assembly
  variant calling, gwas

Social
  Publications via Google Scholar.
  Coding adventures at GitHub.
  Open Instagram for my foto/video eruptions.
  Read Twitter/X and Bluesky to follow my latest short texts.
  Find inspiration from my book list using Goodreads.

Education
  Msc Computer Science, University of Ljubljana
  PhD Bioinformatics, University of Zurich

Blogs
  202505 pubScan: Explore your scientific co-authorship network
  202412 kaj je tam zunaj? whats out there?, 366 days, 366 Instagram posts
  202301 splicekit, a platform for differential splicing analysis of short-read RNA-seq data
  202207 Erich Fromm: To Have or to Be and the Muralto travel quest
  202201 Mysql insert binary data from TAB files
  202108 Fifth-metatarsal fracture, a transformative lesson
  202105 Javascript href, onclick and command-click

Philosophy
  The truth is rarely pure and never simple.

Notes
  Short code notes: IT stuff I use and re-use.

Software
  pubScan: explore your scientific co-authorship network
  splicekit: integrative analysis of splicing
    scanRBP: tell me where a RNA-binding protein is acting
    pybio: download and search any (almost any) genome
    expressRNA: a web platform for post-transcriptional analysis
    microbeAtlas: microbes on the web!
In doubt, remember: the situation is hopeless, but not serious.